I sugest trying tissue paper that is used for wraping presents for a defuser. It doesn’t block IR and a couple of layers should do the trick.
I personally would leave the ribbon cables the way they are and see if the board could be monted on the inside of the frame out of the way personally. I’ve worked on simmular cables in the past and hated the entire process. Perhaps look into some type of extention cable to attach to the board?
In a few months, I plan on atempting something like this. I found a couple of IR cameras on the internet that were reasonably priced. just do a search for mini spy cameras. Since they are specificly designed for IR imaging, they may provide optimal if you have a PCI card that supports that type of input.